Published Papers

Published Papers:    (also see our EU funders’ page on Open Access)

  1. Heers, A.M., Rankin, J.W., Hutchinson, J.R. 2018. Building a bird: Musculoskeletal modeling and simulation of wing-assisted incline running during avian ontogeny. Frontiers in Bioengineering and Biotechnology 6:140. https://doi.org/10.3389/fbioe.2018.00140
  2. Ellis, R., Rankin, J.W., Hutchinson, J.R. 2018. Limb kinematics, kinetics and muscle dynamics during the sit-to-stand transition in greyhounds. Frontiers in Bioengineering and Biotechnology 6:162. https://doi.org/10.3389/fbioe.2018.00162 Data available at https://figshare.com/projects/Limb_Kinematics_Kinetics_and_Muscle_Dynamics_During_the_Sit-to-Stand_Transition_in_Greyhounds_data/55904
  3. Monticelli, P., Ronaldson, H.L., Hutchinson, J.R., Cuff, A.R., d’Ovidio D., Adami, C. 2019. Medetomidine-ketamine-sevoflurane anaesthesia in juvenile Nile crocodiles (Crocodylus niloticus) undergoing experimental surgery. Veterinary Anaesthesia and Analgesia 46:84-89. https://doi.org/10.1016/j.vaa.2018.09.004   Repository link to manuscript: (pending)
  4. Cuff, A.R., Daley, M.A., Michel, K.B., Allen, V.R., Lamas, Luis P., Adami, C., Monticelli, P., Pelligand, L., Hutchinson, J.R. 2019. Relating neuromuscular control to functional anatomy of limb muscles in extant archosaurs. Journal of Morphology 280:666-680. https://doi.org/10.1002/jmor.20973    Repository link to manuscript: http://researchonline.rvc.ac.uk/11973/
  5. Otero, A., Allen, V., Pol, D., Hutchinson, J.R. 2017. Forelimb muscle and joint actions in Archosauria: insights from Crocodylus johnstoni (Pseudosuchia) and Mussaurus patagonicus (Sauropodomorpha). PeerJ 5:e3976. https://doi.org/10.7717/peerj.3976 Models available at Figshare: https://figshare.com/articles/Crocodylus_musculoskeletal_models/4928696 and https://figshare.com/articles/Mussaurus_musculoskeletal_models/4928684
  6. Otero, A., Cuff, A.R., Allen, V., Sumner-Rooney, L., Pol, D., Hutchinson, J.R. 2019. Ontogenetic changes in the body plan of the sauropodomorph dinosaur Mussaurus patagonicus reveal shifts of locomotor stance during growth. Scientific Reports 9:7614. https://doi.org/10.1038/s41598-019-44037-1 Data available at https://figshare.com/s/264325d699de7323aa4e
  7. Bishop, P.J. 2019. Testing the function of dromaeosaurid (Dinosauria, Theropoda) ‘sickle claws’ through musculoskeletal modelling and optimization. PeerJ 7:e7577. https://doi.org/10.7717/peerj.7577 Supplementary code and model files: https://peerj.com/articles/7577/#supp-2
  8. Hutchinson, J.R., Felkler, D., Houston, K., Chang, Y.-M., Brueggen, J., Kledzik, D. and Vliet, K.A. 2019. Divergent evolution of terrestrial locomotor abilities in extant Crocodylia. Scientific Reports 9:19302. https://doi.org/10.1038/s41598-019-55768-6 Data available at https://doi.org/10.6084/m9.figshare.11322035.v1
  9. Scheyer, T.M., Hutchinson, J.R., Strauss, O., Delfino, M., Carrillo-Briceño, J.D., Sánchez, R., Sánchez-Villagra, M.R. 2019. Giant extinct caiman breaks constraint on the axial skeleton of extant crocodylians. eLife 8:e49972. https://doi.org/10.7554/eLife.49972
  10. Ronaldson, H.L., Monticelli, P., Cuff, A.R., Michel, K.B., d’Ovidio, D., Adami, C. Anesthesia and anesthetic-related complications of 8 Elegant-Crested Tinamous (Eudromia elegans) undergoing experimental surgery. Journal of Avian Medicine and Surgery 34(1):17-25. https://doi.org/10.1647/1082-6742-34.1.17 Repository link to manuscript: (pending)
  11. Demuth, O.E., Rayfield, E.J., Hutchinson, J.R., 2020, 3D hindlimb joint mobility of the stem-archosaur Euparkeria capensis with implications for postural evolution within Archosauria. Scientific Reports 10:15357. https://www.nature.com/articles/s41598-020-70175-y Data available at https://figshare.com/articles/dataset/Euparkeria_microCT_scan_data/12283811

  12. Bishop, P.J., Bates, K.T., Allen, V.R., Henderson, D.M., Randau, M., Hutchinson, J.R. 2020. Relationships of mass properties and body proportions to locomotor habit in terrestrial Archosauria. Paleobiology 46:550-568. doi: https://doi.org/10.1017/pab.2020.47 Data available at https://datadryad.org/stash/dataset/doi:10.5061/dryad.msbcc2fwh
  13. Bishop, P.J., Cuff, A.R., Hutchinson, J.R. 2020. How to build a dinosaur: musculoskeletal modelling and simulation of locomotor biomechanics in extinct animals. Paleobiology 47:1-38. doi: https://doi.org/10.1017/pab.2020.46 (Featured Article– see https://www.cambridge.org/core/blog/2021/01/18/building-your-own-virtual-dinosaur/) Data available at https://datadryad.org/stash/dataset/doi:10.5061/dryad.73n5tb2v9
  14. Michel, K.B., West, T.G., Daley, M.A., Allen, V.R., Hutchinson, J.R. 2020. Appendicular muscle physiology and biomechanics in Crocodylus niloticus. Integrative Organismal Biology obaa038. https://doi.org/10.1093/iob/obaa038
  15. Schachner, E.R., Hedrick, B.P., Richbourg, H.A., Hutchinson, J.R., Farmer, C.G. 2021. Anatomy, ontogeny, and evolution of the archosaurian respiratory system: a case study on Alligator mississippiensis and Struthio camelus. Journal of Anatomy, published online. doi: https://doi.org/10.1111/joa.13358 Data available at https://datadryad.org/stash/dataset/doi:10.5061/dryad.3xsj3txdh
  16. van Beesel, J., Hutchinson, J.R., Hublin, J.-J., Melillo, S. 2021. Exploring the functional morphology of the Gorilla shoulder through musculoskeletal modelling. Journal of Anatomy, published online. doi: https://doi.org/10.1111/joa.13412
  17. Allen, V.R., Kilbourne, B.M., Hutchinson, J.R. 2021. The evolution of pelvic limb muscle moment arms in bird-line archosaurs. Science Advances 7:eabe2778. https://advances.sciencemag.org/content/7/12/eabe2778 
  18. Bishop, P.J., Michel, K.B., Falisse, A., Cuff, A.R., Allen, V.R., De Groote, F., Hutchinson, J.R. 2021. Computational modelling of muscle fibre operating ranges in the hindlimb of a small ground bird (Eudromia elegans), with implications for modelling locomotion in extinct species. PLOS Computational Biology 7:e1008843. https://doi.org/10.1371/journal.pcbi.1008843 Data available at http://xmaportal.org/, study identifier ‘Tinamou Walking and Running’
  19. Wiseman, A.L.A., Bishop, P.J., Demuth, O.E., Cuff, A.R., Michel, K.B., Hutchinson, J.R. 2021. Musculoskeletal modelling of the Nile crocodile (Crocodylus niloticus) hindlimb: effects of limb posture on leverage during terrestrial locomotion. Journal of Anatomy, published online. https://doi.org/10.1111/joa.13431 Data available at https://figshare.com/articles/software/_/14216138
  20. Bishop, P.J., Falisse, A., De Groote, F., Hutchinson, J.R. 2021. Predictive simulations of musculoskeletal function and jumping performance in a generalized bird. Integrative Organismal Biology, in press.